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Эволюция и распространение свиного вируса гриппа А (Н1N1)
УДК:
578.831
Автор статьи:
Жуматов К.Х.
Место работы автора:
ДГП Институт микробиологии и вирусологии РГП ЦБИ КН МОН РК
Название журнала:
Биотехнология. Теория и практика
Год выпуска:
2010
Номер журнала:
3
Страницы:
с.8-17
Резюме на казахском языке:
Грипп А (H1N1) вирусы - тыныс жолдары маусымдық жұқпалы ауруларының аса өзекті себепкерлерінің бірі, оған деген қызығушылық жуырдағы доңыз тұмауы эпидемиясынабайланысты айтарлықтай артты. Шолулық мақалада грипп А (H1N1) вирусының генетикалық өзгергіштігі мен таралу мәселелері қарастырылған. Әр жылдардағы грипп А (H1N1) эпидемиясықоздырғышының салыстырмалы филогенетикалық сипаттамасы беріліп, грипп қоздырғышы қоршаған ортаның өзгеру жағыдайына айрықша бейімді деп қортындылайды.
Резюме на английском языке:
Influenza A (H1N1) virus is one of the most important etiologic agent of seasonal respiratory infections interest to which grew up greatly after the last epidemic of “swine influenza”. The questionsof genetic variability and circulation of influenza A (H1N1) virus are discussed in this review article. The comparative phylogenetic characteristics of the agents of different influenza Н1N1 outbreaks are given; the conclusion about their considerable adaptability to variable environmental conditions is drawn.
Список литературы:
1. Palese P., Shaw M.L. Orthomyxoviridae: The viruses and their replication, In: D.M. Knipe, P.M. Howley (eds), Fields Virology 5th ed. Philadelphia 1647-1689.
2. O’Neill R.E., Talon J., Palese P. The influenza virus NEP (NS2 protein) mediates the nuclear export of viral nucleoproteins.The EMBO Journal. 1998; 17:288-296.
3. Chen W., Calvo P.A., Malide D. et al. A novel influenza A virus mitochondrial protein that induces cell death. Nature medicine. 2001; 7:1306-1312.
4. Fouchier R.A., Munster V., Wallensten A. et al. Characterization of a novel influenza A virus hemagglutinin subtype (H16) obtained from black-headed gulls. J Virol 2005; 79:2814–2822.
5. Львов Д.К., Забережный А.Д., Алипер Т.И. Вирусы гриппа: события и прогнозы. Природа. 2006, №6, С. 3-13.
6. Gatherer D. The 2009 H1N1 influenza outbreak in its historical context. J Clin Virol. 2009; 45:174-178.
7. Horimoto T., Kawaoka Y. Influenza: Lessons from past pandemics, warnings from current incidents. Nature Rev Microbiol. 2005; 3:591-600.
8. Keawcharoen J., Oraveerakul K., Kuiken T. et al. Avian influenza H5N1 in tigers and leopards. Emerg Infect Dis, 2004; 10:2189-2191.
9. Yoon K.J., Cooper V.L., Schwartz K.J. et al. Influenza virus infection in racing greyhounds. Emerg Infect Dis, 2005; 11:1974-1976.
10. Osterhaus A. D., Rimmelzwaan G. F., Martina B. E. et al. Influenza B Virus in Seals. Science, 2000;288:1051—1053.
11. Webster R.G, Bean W.J., Gorman O.T. et al. Evolution and ecology of influenza A viruses. Microbiol Rev. 1992. 56: 152–179.
12. Webster R.G. “H5N1 influenza: Continuing evolution and spread”. Bangkok International Conference on Avian Influenza 2008: Integration from Knowledge to Control, P.12. WHO, 2008. http://www. who.int/csr/disease/avian_influenza.org
13. Olsen B., Munster V.J., Wallensten A. et al. () Global patterns of influenza a virus inwild birds. Science. 2006; 312:384–388.
14. World Health Organization (WHO). H5N1 avian influenza: timeline of major events // 2008, http:// www.who.int/csr/disease/avian_influenza/ai_timeline/en/index.html
15. Mandell G., Douglas J., Bennet R. (Eds). Principles and practice of infectious diseases. Sixth edition. Philadelphia: Churchill Livingstone, 2005.
16. World Health Organization (WHO). Avian influenza: assessing the pandemic threat. The World Health Organization 2005. Available from: http://www.who.int/csr/disease/influenza/WHO_CDS_2005_29/en/index.html.
17. Rosenau M.J., Last J.M. (1980). Maxcy-Rosenau Preventative Medicine and Public Health. New York: Appleton-Century-Crofts.
18. Simonsen, L., Clarke M., Schonberger J.et al. Pandemic versus epidemic influenza mortality: a pattern of changing age distribution. J Infect Dis. 1998; 178:53–60.
19. Reid A.H., Taubenberger J.K. The origin of the 1918 pandemic influenza virus: a continuing enigma. J Gen Virol. 2003; 84:2285–2292.
20. Taubenberger J., Reid A. Lourens R. et al. Characterization of the 1918 influenza virus polymerases genes. Nature. 2005; 437:889–93.
21. Tumpey T., Basler C., Aguilar P. et al. Characterisation of the reconstructed 1918 Spanish influenza pandemic virus. Science. 2005; 310:77–80.
22. Fanning T.G., Slemons R.D., Reid A.H. et al. 1917 avian influenza virus sequences suggest that the 1918 pandemic virus did not acquire .its hemagglutinin directly from birds. J.Virol. 2002; 76:7860-2.
23. Reid A.H., Fanning T.G., Slemons R.D. et al. Relationship of pre-1918 avian influenza HA and NP sequences to subsequent avian influenza strains. Avian Dis. 2003; 47:921-5.
24. Webster R. G., Sharp G. B., Claas E. C. Interspecies transmission of influenza viruses. Am J Respir Crit Care Med. 1995; 152:25–30.
25. Kawaoka Y., Krauss S., Webster R. G. Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics. J Virol. 1989; 63:4603–4608.
26. Simonsen L., Clarke M. J., Schonberger et al. Pandemic versus epidemic influenza mortality: a pattern of changing age distribution. J Infect Dis. 1998; 178:53–60.
27. Black M. An introduction to avian and pandemic influenza. NSW Public Health Bulletin, 2006; 17: 99-103.
28. Eickhoff T.C., Meiklejohn G. Protection against Hong Kong influenza by adjuvant vaccine containing A2-Ann Arbor-67. Bull World Health Organ. 1969; 41:562–3.
29. Smith W, Andrewes C, Laidlaw P. A virus obtained from influenza patients. Lancet. 1933;2:66-68.
30. Palese P., Schulman J.L. RNA pattern of “swine” influenza virus isolated from man is similar to those of other swine influenza viruses. Nature. 1976; 263:528-530.
31. Смородинцев, Лузянина Т.А., Иванова Н.А. Возвращение вируса гриппа А1 и проблема происхождения пандемических втрусов // Вопр. вирусол. - 1979; 1:87-91.
32. Чувакова З.К. Реликтовые вирусы гриппа А (H1N1). Биология и значение на современном этапе эволюции возбудителя: Автореф. …докт. биол. наук. – Алматы, 1993. - 102 с.
33. Koen J. A practical method for field diagnoses of swine diseases. Am J VetMed. 1919; 14:468–70.
34. Shope R. Swine influenza. J Exp Med. 1931; 54:373–85.
35. Vincent A.L., Lager K.M., Ma W. et al. Evaluation of hemagglutinin subtype 1 swine influenza viruses from the United States. Vet Microbiol. 2006; 118:212–22.
36. Subbarao K., Swayne D.E., Olsen C.W. Epidemiology and control of human and animal influenza. In: Kawaoka Y. (ed). Influenza virology: current topics. Caister Academic Press; 2006. p. 229–280.
37. Van Reeth K. Avian and swine influenza viruses: our current understanding of the zoonotic risk. Vet Res 2007; 38:243–60.
38. Olsen C.W. The emergence of novel swine influenza viruses in North America. Virus Res 2002; 85:199–210.
39. Webby R.J., Swenson S.L., Krauss S.L. et al. Evolution of swine H3N2 influenza viruses in the United States. J Virol. 2000; 74:8243–51.
40. Shu L.L., Lin Y.P.,Wright S.M. et al. Evidence for interspecies transmission and reassortment of influenza A viruses in pigs in southern China. Virology. 1994; 202:825–33.
41. Ducatez, Webster R.G., Webby R.J. Animal influenza epidemiology. Vaccine 2008; 26(Suppl. 4):D67–9.
42. Shi W.F., Gibbs M.J., Zhang Y.Z. et al. Genetic analysis of four porcine avian influenza viruses isolated from Shandong, China. Arch Virol. 2008; 153:211–7.
43. Takemae N., Parchariyanon S., Damrongwatanapokin S. et al. Genetic diversity of swine influenza viruses isolated from pigs during 2000 to 2005 in Thailand. Influenza Other Respir Viruses. 2008;2: 181–9.
44. Yu H., Zhang P.C., Zhou Y.J. et al. Isolation and genetic сharacterization of avian-like H1N1 and novel ressortant H1N2 influenza viruses from pigs in China. Biochem Biophys Res Commun. 2009 May 19. [Epub ahead of print].
45. Takano R., Nidom C.A., Kiso M. et al. A comparison of the pathogenicity of avian and swineH5N1influenza viruses in Indonesia. Arch Virol. 2009; 154:677–81.
46. Choi Y.K., Nguyen T.D., Ozaki H.C, et al. Studies of H5N1 influenza virus infection of pigs by using viruses isolated in Vietnam and Thailand in 2004. J Virol. 2005; 79:10821–5.
47. Lipatov A.S., Kwon Y.K., Sarmento L.V. et al. Domestic pigs have low susceptibility to H5N1 highly pathogenic avian influenza viruses. PLoS Pathog 2008; 4:e1000102.
48. Santhia K., Ramy A., Jayaningsih P. et al. Avian influenzaAH5N1infections in Bali Province, Indonesia: a behavioral, virological and seroepidemiological study. Influenza Other Respir Viruses. 2009;3: 81–9
49. Reid A. H., Fanning T. G., Janczewski T. A. et al. Characterization of the 1918 Spanish influenza virus matrix gene segment. J. Virol. 2002; 76:10717–10723.
50. Taubenberger J. K., Reid A. H., Fanning T. G. The 1918 influenza virus: a killer comes into view. Virology 2000; 274:241–245.
51. Taubenberger J. K., Reid A. H., Krafft A. E. et al. Initial genetic characterization of the 1918 ‘Spanish’ influenza virus. Science. 1997; 275:1793–1796.
52. Reid A. H., Fanning T. G., Janczewski T. A., Taubenberger J. K. Characterization of the 1918 “Spanish” influenza virus neuraminidase gene. Proc. Natl. Acad. Sci. USA. 2000; 97:6785–6790.
53. Reid A. H., Fanning T. G., Hultin J. V., Taubenberger J. K. Origin and evolution of the 1918 Spanish influenza virus hemagglutinin gene. Proc. Natl. Acad. Sci. USA. 1999; 96, 1651–1656.
54. Reid A. H., Taubenberger J. K., Fanning T. G. The 1918 Spanish influenza: integrating history and biology. Microbes Infect. 2001; 3:81–87.
55. Basler C., Reid A., Dybing J. et al. Sequence of the 1918 pandemic influenza virus nonstructural gene (NS) segment and characterization of recombinant viruses bearing the 1918 NS genes. Proc. Natl. Acad. Sci. USA. 2001; 98:2746–2751.
56. Tumpey T. M., Garc??a-Sastre A., Taubenberger J. K. et al. Pathogenicity and immunogenicity of influenza viruses with genes from the 1918 pandemic virus. Proc. Natl. Acad. Sci. USA. 2004; 101:3166–3171
57. Investigation Team. Emergence of a novel swine-origin influenza A (H1N1). N Engl J Med 2009; 360:2605-15.
58. Fraser C., Donnelly C.A., Cauchemez S. et al. Pandemic potential of a strain of influenza A (H1N1): early findings. Science. 2009; 325:481-483.
59. Neumann G., Noda T., Kawaoka Y. Emergence and pandemic potential of swine-origin H1N1 influenza virus. Nature 2009; 459:931–939.
60. T.T. Wang, P. Palese, Unraveling the mystery of swine influenza virus. Cell 137, 983–985 (2009)
61. Frost W. Statistics of influenza morbidity with special reference to certain factors in case incidence and case fatality. Public Health Rep. 1920; 35:584–597.
62. Taubenberger J. K., Morens D. M. 1918 Influenza: the Mother of All Pandemics. Emerging InfectiousDiseases. 2006; 12: 51–22.
63. Супотницкий М.В. Пандемия испанки 1918-1920 гг. в контексте других гриппозныхпандемий и птичьего гриппа http://supotnitskiy.ru/
1. Palese P., Shaw M.L. Orthomyxoviridae: The viruses and their replication, In: D.M. Knipe, P.M. Howley (eds), Fields Virology 5th ed. Philadelphia 1647-1689.
2. O’Neill R.E., Talon J., Palese P. The influenza virus NEP (NS2 protein) mediates the nuclear export of viral nucleoproteins.The EMBO Journal. 1998; 17:288-296.
3. Chen W., Calvo P.A., Malide D. et al. A novel influenza A virus mitochondrial protein that induces cell death. Nature medicine. 2001; 7:1306-1312.
4. Fouchier R.A., Munster V., Wallensten A. et al. Characterization of a novel influenza A virus hemagglutinin subtype (H16) obtained from black-headed gulls. J Virol 2005; 79:2814–2822.
5. Львов Д.К., Забережный А.Д., Алипер Т.И. Вирусы гриппа: события и прогнозы. Природа. 2006, №6, С. 3-13.
6. Gatherer D. The 2009 H1N1 influenza outbreak in its historical context. J Clin Virol. 2009; 45:174-178.
7. Horimoto T., Kawaoka Y. Influenza: Lessons from past pandemics, warnings from current incidents. Nature Rev Microbiol. 2005; 3:591-600.
8. Keawcharoen J., Oraveerakul K., Kuiken T. et al. Avian influenza H5N1 in tigers and leopards. Emerg Infect Dis, 2004; 10:2189-2191.
9. Yoon K.J., Cooper V.L., Schwartz K.J. et al. Influenza virus infection in racing greyhounds. Emerg Infect Dis, 2005; 11:1974-1976.
10. Osterhaus A. D., Rimmelzwaan G. F., Martina B. E. et al. Influenza B Virus in Seals. Science, 2000;288:1051—1053.
11. Webster R.G, Bean W.J., Gorman O.T. et al. Evolution and ecology of influenza A viruses. Microbiol Rev. 1992. 56: 152–179.
12. Webster R.G. “H5N1 influenza: Continuing evolution and spread”. Bangkok International Conference on Avian Influenza 2008: Integration from Knowledge to Control, P.12. WHO, 2008. http://www. who.int/csr/disease/avian_influenza.org
13. Olsen B., Munster V.J., Wallensten A. et al. () Global patterns of influenza a virus inwild birds. Science. 2006; 312:384–388.
14. World Health Organization (WHO). H5N1 avian influenza: timeline of major events // 2008, http:// www.who.int/csr/disease/avian_influenza/ai_timeline/en/index.html
15. Mandell G., Douglas J., Bennet R. (Eds). Principles and practice of infectious diseases. Sixth edition. Philadelphia: Churchill Livingstone, 2005.
16. World Health Organization (WHO). Avian influenza: assessing the pandemic threat. The World Health Organization 2005. Available from: http://www.who.int/csr/disease/influenza/WHO_CDS_2005_29/en/index.html.
17. Rosenau M.J., Last J.M. (1980). Maxcy-Rosenau Preventative Medicine and Public Health. New York: Appleton-Century-Crofts.
18. Simonsen, L., Clarke M., Schonberger J.et al. Pandemic versus epidemic influenza mortality: a pattern of changing age distribution. J Infect Dis. 1998; 178:53–60.
19. Reid A.H., Taubenberger J.K. The origin of the 1918 pandemic influenza virus: a continuing enigma. J Gen Virol. 2003; 84:2285–2292.
20. Taubenberger J., Reid A. Lourens R. et al. Characterization of the 1918 influenza virus polymerases genes. Nature. 2005; 437:889–93.
21. Tumpey T., Basler C., Aguilar P. et al. Characterisation of the reconstructed 1918 Spanish influenza pandemic virus. Science. 2005; 310:77–80.
22. Fanning T.G., Slemons R.D., Reid A.H. et al. 1917 avian influenza virus sequences suggest that the 1918 pandemic virus did not acquire .its hemagglutinin directly from birds. J.Virol. 2002; 76:7860-2.
23. Reid A.H., Fanning T.G., Slemons R.D. et al. Relationship of pre-1918 avian influenza HA and NP sequences to subsequent avian influenza strains. Avian Dis. 2003; 47:921-5.
24. Webster R. G., Sharp G. B., Claas E. C. Interspecies transmission of influenza viruses. Am J Respir Crit Care Med. 1995; 152:25–30.
25. Kawaoka Y., Krauss S., Webster R. G. Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics. J Virol. 1989; 63:4603–4608.
26. Simonsen L., Clarke M. J., Schonberger et al. Pandemic versus epidemic influenza mortality: a pattern of changing age distribution. J Infect Dis. 1998; 178:53–60.
27. Black M. An introduction to avian and pandemic influenza. NSW Public Health Bulletin, 2006; 17: 99-103.
28. Eickhoff T.C., Meiklejohn G. Protection against Hong Kong influenza by adjuvant vaccine containing A2-Ann Arbor-67. Bull World Health Organ. 1969; 41:562–3.
29. Smith W, Andrewes C, Laidlaw P. A virus obtained from influenza patients. Lancet. 1933;2:66-68.
30. Palese P., Schulman J.L. RNA pattern of “swine” influenza virus isolated from man is similar to those of other swine influenza viruses. Nature. 1976; 263:528-530.
31. Смородинцев, Лузянина Т.А., Иванова Н.А. Возвращение вируса гриппа А1 и проблема происхождения пандемических втрусов // Вопр. вирусол. - 1979; 1:87-91.
32. Чувакова З.К. Реликтовые вирусы гриппа А (H1N1). Биология и значение на современном этапе эволюции возбудителя: Автореф. …докт. биол. наук. – Алматы, 1993. - 102 с.
33. Koen J. A practical method for field diagnoses of swine diseases. Am J VetMed. 1919; 14:468–70.
34. Shope R. Swine influenza. J Exp Med. 1931; 54:373–85.
35. Vincent A.L., Lager K.M., Ma W. et al. Evaluation of hemagglutinin subtype 1 swine influenza viruses from the United States. Vet Microbiol. 2006; 118:212–22.
36. Subbarao K., Swayne D.E., Olsen C.W. Epidemiology and control of human and animal influenza. In: Kawaoka Y. (ed). Influenza virology: current topics. Caister Academic Press; 2006. p. 229–280.
37. Van Reeth K. Avian and swine influenza viruses: our current understanding of the zoonotic risk. Vet Res 2007; 38:243–60.
38. Olsen C.W. The emergence of novel swine influenza viruses in North America. Virus Res 2002; 85:199–210.
39. Webby R.J., Swenson S.L., Krauss S.L. et al. Evolution of swine H3N2 influenza viruses in the United States. J Virol. 2000; 74:8243–51.
40. Shu L.L., Lin Y.P.,Wright S.M. et al. Evidence for interspecies transmission and reassortment of influenza A viruses in pigs in southern China. Virology. 1994; 202:825–33.
41. Ducatez, Webster R.G., Webby R.J. Animal influenza epidemiology. Vaccine 2008; 26(Suppl. 4):D67–9.
42. Shi W.F., Gibbs M.J., Zhang Y.Z. et al. Genetic analysis of four porcine avian influenza viruses isolated from Shandong, China. Arch Virol. 2008; 153:211–7.
43. Takemae N., Parchariyanon S., Damrongwatanapokin S. et al. Genetic diversity of swine influenza viruses isolated from pigs during 2000 to 2005 in Thailand. Influenza Other Respir Viruses. 2008;2: 181–9.
44. Yu H., Zhang P.C., Zhou Y.J. et al. Isolation and genetic сharacterization of avian-like H1N1 and novel ressortant H1N2 influenza viruses from pigs in China. Biochem Biophys Res Commun. 2009 May 19. [Epub ahead of print].
45. Takano R., Nidom C.A., Kiso M. et al. A comparison of the pathogenicity of avian and swineH5N1influenza viruses in Indonesia. Arch Virol. 2009; 154:677–81.
46. Choi Y.K., Nguyen T.D., Ozaki H.C, et al. Studies of H5N1 influenza virus infection of pigs by using viruses isolated in Vietnam and Thailand in 2004. J Virol. 2005; 79:10821–5.
47. Lipatov A.S., Kwon Y.K., Sarmento L.V. et al. Domestic pigs have low susceptibility to H5N1 highly pathogenic avian influenza viruses. PLoS Pathog 2008; 4:e1000102.
48. Santhia K., Ramy A., Jayaningsih P. et al. Avian influenzaAH5N1infections in Bali Province, Indonesia: a behavioral, virological and seroepidemiological study. Influenza Other Respir Viruses. 2009;3: 81–9
49. Reid A. H., Fanning T. G., Janczewski T. A. et al. Characterization of the 1918 Spanish influenza virus matrix gene segment. J. Virol. 2002; 76:10717–10723.
50. Taubenberger J. K., Reid A. H., Fanning T. G. The 1918 influenza virus: a killer comes into view. Virology 2000; 274:241–245.
51. Taubenberger J. K., Reid A. H., Krafft A. E. et al. Initial genetic characterization of the 1918 ‘Spanish’ influenza virus. Science. 1997; 275:1793–1796.
52. Reid A. H., Fanning T. G., Janczewski T. A., Taubenberger J. K. Characterization of the 1918 “Spanish” influenza virus neuraminidase gene. Proc. Natl. Acad. Sci. USA. 2000; 97:6785–6790.
53. Reid A. H., Fanning T. G., Hultin J. V., Taubenberger J. K. Origin and evolution of the 1918 Spanish influenza virus hemagglutinin gene. Proc. Natl. Acad. Sci. USA. 1999; 96, 1651–1656.
54. Reid A. H., Taubenberger J. K., Fanning T. G. The 1918 Spanish influenza: integrating history and biology. Microbes Infect. 2001; 3:81–87.
55. Basler C., Reid A., Dybing J. et al. Sequence of the 1918 pandemic influenza virus nonstructural gene (NS) segment and characterization of recombinant viruses bearing the 1918 NS genes. Proc. Natl. Acad. Sci. USA. 2001; 98:2746–2751.
56. Tumpey T. M., Garc??a-Sastre A., Taubenberger J. K. et al. Pathogenicity and immunogenicity of influenza viruses with genes from the 1918 pandemic virus. Proc. Natl. Acad. Sci. USA. 2004; 101:3166–3171
57. Investigation Team. Emergence of a novel swine-origin influenza A (H1N1). N Engl J Med 2009; 360:2605-15.
58. Fraser C., Donnelly C.A., Cauchemez S. et al. Pandemic potential of a strain of influenza A (H1N1): early findings. Science. 2009; 325:481-483.
59. Neumann G., Noda T., Kawaoka Y. Emergence and pandemic potential of swine-origin H1N1 influenza virus. Nature 2009; 459:931–939.
60. T.T. Wang, P. Palese, Unraveling the mystery of swine influenza virus. Cell 137, 983–985 (2009)
61. Frost W. Statistics of influenza morbidity with special reference to certain factors in case incidence and case fatality. Public Health Rep. 1920; 35:584–597.
62. Taubenberger J. K., Morens D. M. 1918 Influenza: the Mother of All Pandemics. Emerging InfectiousDiseases. 2006; 12: 51–22.
63. Супотницкий М.В. Пандемия испанки 1918-1920 гг. в контексте других гриппозныхпандемий и птичьего гриппа http://supotnitskiy.ru/
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Вирус гриппа А (Н1N1) является одним из наиболее актуальных этиологических агентов сезонной заболеваемости респираторными инфекциями, интерес к которому значительно возрос в связи с недавней эпидемией свиного гриппа. В обзорной статье рассмотрены вопросы генетической вариабельностии распространения вируса гриппа А (Н1N1). Дается сравнительная филогенетическая характеристика возбудителей эпидемических вспышек гриппа А (Н1N1) различных лет, делается вывод об исключительной приспособляемости возбудителя гриппа к изменяющимся условиям окружающей среды.
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